DOE Joint Genome Institute
The U.S. Department of Energy Joint Genome Institute, currently located in Walnut Creek, California, was created in 1997 to unite the expertise and resources in genome mapping, DNA sequencing, technology ... Address: 2800 Mitchell Dr # 100, Walnut Creek, CA 94598 Founded: 1997 Phone: (925) 296-5670 Parent organization: Office of Science: : : : : Website: Hours: Category: : Place name: Website: http://www.jgi.doe.gov/ Category: Research institute Suggest an editUnable to add this file. Please check that it is a valid photo. Unable to add this file. Please check that it is a valid photo. · Own this business?Add missing informationAdd business hours Unable to add this file. Please check that it is a valid photo.
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DOE Joint Genome Institute Employees
Self Employed July 2014 - Present
The Scientist February 2014 - June 2014
DOE Joint Genome Institute October 2013 - February 2014
California Institute for Regenerative Medicine June 2013 - September 2013
Stanford Medical Center Communications Office April 2013 - June 2013
Big Picture Science radio show January 2013 - March 2013
Santa Cruz Sentinel September 2012 - December 2012
Healthy Communities Institute May 2011 - August 2011
California Department of Public Health - Immunization Branch July 2000 - January 2011
California Department of Public Health - Immunization Branch July 1997 - June 2000
Skills
Editing, Non-profits, Research, Journalism, Storytelling, Blogging, Newsletters, Press Releases, Social Media, Facebook, Science, Nonprofits, Copy Editing, Grant Writing, Magazines
Education
UC Santa Cruz 2012 — 2013
Certificate, Science Communication
Laney College 2011 — 2012
n.a., Journalism
San Diego State University-California State University 1995 — 1997
MPH, Epidemiology, Biostatistics
University of California, Riverside 1990 — 1994
Biology, biochemistry, biomedical sciences
DOE - Joint Genome Institute April 2011 - Present
DOE - Joint Genome Institute April 2004 - April 2011
Integrated Genomics March 2003 - April 2004
Integrated Genomics August 1999 - March 2003
Argonne National Laboratory August 1998 - August 1999
University of Illinois at Urbana-Champaign April 1996 - August 1998
Skills
Genomics, Bioinformatics, Sequencing, Metagenomics, Metabolic Engineering, Annotation, Ontologies, Evolution, Computational Genomics, Genome Analysis, Bioengineering, Computational Biology, Sequence Analysis, Bioenergy, Molecular Biology, DNA sequencing, Comparative Genomics, Biotechnology, Genetics, Protein Chemistry, Biochemistry, Microbiology, Lifesciences, DNA, Biology, Proteomics, Evolutionary Biology, Systems Biology, NGS data analysis, Metadata Management, Data Management, Large-scale Data..., Transcriptomics
Education
Panepistimio Kritis 1992 — 1996
PhD, Molecular Biology & Biotechnology
Panepistimio Kritis 1989 — 1991
MSc, Molecular Biology & Biotechnology
Aristoteleion Panepistimion Thessalonikis 1983 — 1988
BSc, Biological Sciences
Driver Group, L.L.C. August 2014 - Present
Driver Group, L.L.C. January 2014 - August 2014
University of Pennsylvania September 2010 - December 2013
University of Pennsylvania September 2008 - December 2013
DOE Joint Genome Institute March 2012 - June 2012
Skills
Genomics, Computational Biology, Cancer Biology, Evolution, Bioinformatics, Science, R, Cell Biology, Perl, C++, Sequence Analysis, Genome Sequencing, Genetics, Scientific Computing
Education
University of Pennsylvania 2008 — 2013
Doctor of Philosophy (Ph.D.), Genomics and Computational Biology
Boston College 2004 — 2008
B.S., Biology & Computer Science
DOE Joint Genome Institute May 2014 - Present
Henlius Biopharmaceuticals Inc. January 2014 - May 2014
The Ohio State University/ OARDC September 2008 - December 2013
Skills
Molecular Biology, PCR, Cell Culture, Biochemistry, Genetics, Western Blotting, Protein Purification, Cell Biology, Genomics, Biotechnology, Bioinformatics, Lifesciences, Protein Expression, Microbiology, Molecular Cloning, DNA, RT-PCR, Northern Blotting, Vaccines, RNAi, Site-directed..., Protein Chemistry, SDS-PAGE, Assay Development, Spectroscopy, Gel Electrophoresis, Cell, Microscopy, RNA, ELISA, Experimental Design, Fluorescence Microscopy, ImageJ, qPCR, Tissue Culture, Protein-protein..., Purification, Transfection, Next generation..., DNA microarray, Biostatistics, Immunoprecipitation, RNA-Seq
Education
The Ohio State University 2008 — 2013
Doctor of Philosophy (Ph.D.), Plant Pathology/molecular virology
China Agricultural Univeristy 2004 — 2008
BS, Microbiology
WaferGen March 2015 - Present
WaferGen August 2014 - Present
WaferGen December 2013 - July 2014
DOE Joint Genome Institute May 2013 - November 2013
DOE Joint Genome Institute November 2011 - April 2013
University of Georgia January 2009 - October 2011
University of Delaware August 2003 - January 2009
SUNY at Albany October 2002 - August 2003
Skills
Chemostat, Recombinant protein..., Western blot, Microarray, SOLiD deep sequencing, Basic bioinformatics on..., Aerobic and anaerobic..., qRT-PCR, mRNA purification, Transposon mutagenesis, Metagenomics, Transcriptomics, Genomics, Bioinformatics, Biochemistry, Molecular Biology, PCR, RT-PCR, Western Blotting
Education
University of Delaware 2003 — 2009
Doctor of Philosophy (Ph.D.), Marine Biosciences
SUNY at Buffalo 2000 — 2002
Bachelor of Science (B.S.), Biochemistry (Minor: Chemistry)
DOE Joint Genome Institute September 2011 - Present
Stanford University School of Medicine March 2008 - October 2011
The Jackson Laboratory July 2003 - March 2008
UCSD January 2001 - July 2003
USC April 1999 - January 2001
UCSD February 1997 - April 1999
Skills
Biological Databases, Bioinformatics, Genomic Standards, Functional Annotations, Literature Curation, Ontologies, Genomics, Biochemistry, Cell Biology, Computational Biology, Systems Biology, Databases, Microarray, R, Gel Electrophoresis, Gene Expression, Molecular Biology, Science, DNA extraction, Annotation, Assay Development, Biology, Sequencing, BLAST, Cell, DNA, Informatics, Cell Culture, Functional Genomics, Protein Chemistry, Lifesciences, Genetics, Protein Purification, Laboratory, Molecular Genetics, Microscopy, Metagenomics, Sequence Analysis, Comparative Genomics, Western Blotting, PCR, Scientific Writing, Drug Discovery, Cancer, Microbiology, Immunology, Infectious Diseases, Biotechnology, Microarray Analysis, DNA sequencing
Education
Jawaharlal Nehru Vishvavidyalaya 1991 — 1996
PhD, Biochemestry, Life Sciences.
University of Hyderabad 1989 — 1991
M.Sc, Biochemistry
Acharya Nagarjuna University 1986 — 1989
B.Sc, Botany, Zoology, Chemistry
Thermo Fisher, Clinical Next-Generation Sequencing Division (Ion Torrent) January 2014 - Present
SCIDM 1998 - Present
DOE Joint Genome Institute July 2011 - January 2014
Ariadne Inc., subcontract for National Institutes of Health September 2009 - March 2011
Denis Kaznadzey 2007 - 2011
Encyclopedia Genomica GmbH September 2006 - September 2009
Integrated Genomics September 2003 - August 2006
Integrated Genomics 2001 - 2003
Quark Biotech / UIC February 1998 - August 2001
Risetime September 1994 - December 1997
Skills
Computational Biology, Sequence Analysis, Comparative Genomics, Bioinformatics, C/C++, Python, Algorithm Design, OOP/OOD, STL,..., Integrated systems..., Software Project..., Linux administration, Engineering, Biology, Mathematics, Optimizations, System Design, Genomics, Systems Biology, Biotechnology, DNA sequencing, Sequencing, DNA, Biochemistry, Protein Chemistry, Algorithms, Lifesciences, Molecular Biology, Data Mining, High Performance..., Linux, Software Engineering, Databases, Scientific Computing, Software Development, Drug Discovery, PCR, Cell Biology, Cell, Microbiology, Biomarkers, Optimization, Life Sciences, DNA Sequencing, Data Analysis, C++
Education
University of Illinois at Chicago 1991 — 1992
None, molecular genetics
Moscow State University, School of Biology 1984 — 1989
Master of Science (MS), Molecular Biology / Biochemistry
Moscow State University, School of Mathematics and Mechanics 1986 — 1989
certification, CS and Applied Math
Moscow School 57 1982 — 1984
Biology; Math
Maricopa Integrated Health System May 2014 - Present
St. George's University, Grenada January 2010 - May 2014
DOE Joint Genome Institute January 2008 - June 2009
Lawrence Berkeley Labs 2005 - 2009
Joint Genome Institute 2005 - 2007
Skills
Bioinformatics, Molecular Biology, Epidemiology, Lifesciences, Cancer, Genetics, Clinical Research, Microbiology, Biochemistry, Neuroscience, Cell Culture, Biology, Science, Genomics, Medicine, Sequencing, Sequence Analysis, Data Analysis, Public Health, Internal Medicine, Psychiatry, Mental Health, Mental Illness, Life Sciences
Education
St. George's University School of Medicine 2009 — 2012
M.D.
University of California, Los Angeles 2001 — 2005
BS
Bellarmine College Preparatory 1997 — 2001
University of California, Berkeley
Pacific Northwest National Laboratory June 2014 - Present
University of Copenhagen October 2013 - Present
University of California, Berkeley June 2012 - Present
Joint Bioenergy Institute 2010 - Present
DOE Joint Genome Institute 2009 - Present
Lawrence Berkeley National Laboratory November 2007 - Present
SLU, Swedish University of Agricultural Sciences 2003 - November 2007
Swedish University of Agricultural Sciences January 2003 - October 2007
SLU 2003 - 2007
Skills
Genomics, Bioinformatics, Microbial Ecology, Molecular Biology, Microbiology, Computational Biology, Sequence Analysis, Genetics, Science, qPCR, Sequencing, Lifesciences, Environmental..., PCR, DNA, DNA sequencing, Molecular Genetics, Metagenomics, Biofuels, Soil, RT-PCR, Comparative Genomics, Protein Purification, Molecular Cloning, Systems Biology, Proteomics, Microscopy, RNA isolation, Scientific Writing, Functional Genomics, DNA extraction, Mass Spectrometry, Phylogenetics, Protein Chemistry, Protein Expression, Fluorescence Microscopy, Experimental Design, Cell Biology, Biochemistry, Biogeochemistry, recombinant DNA...
Education
Michigan State University 1984 — 1988
Ph.D., Microbial Ecology
Colorado State University 1981 — 1983
Master's degree, Soil Microbiology
DOE Joint Genome Institute October 2014 - Present
DOE Joint Genome Institute July 2014 - Present
Lawrence Berkeley National Laboratory July 2014 - Present
Lawrence Berkeley National Laboratory May 2014 - July 2014
Bio Architecture Lab, Inc. July 2005 - July 2014
University of Washington - Howard Hughes Medical Institute / Jane Coffin Childs Memorial Fund March 2007 - May 2008
UC Berkeley 2002 - 2007
Education
University of California, Berkeley 2002 — 2007
Ph.D., Bioengineering
Tokyo University of Science 1997 — 2001
B.E., Biological Science and Technology
氷取沢高校
DOE Joint Genome Institute November 2009 - Present
University of California, Berkeley January 2013 - Present
Lawrence Berkeley National Laboratory December 2010 - Present
Joint Genome Institute / Lawrence Berkeley National Laboratory September 2003 - November 2009
Sugen/ Pharmacia/ Pfizer March 2001 - September 2003
University of California, Berkeley 1998 - 2001
Skills
Genomics, Bioinformatics, Computational Biology, Comparative Genomics, Molecular Biology, Algorithms, Sequencing, DNA sequencing, Systems Biology, Sequence Analysis, DNA, Genetics
Education
National Research Nuclear University MEPhI (Moscow Engineering Physics Institute) 1988 — 1994
Fluidigm Corporation July 2015 - Present
Investigen September 2012 - September 2014
Australian Centre for Education and Training (ACET) August 2010 - April 2011
Pyramid Sim-Stone May 2005 - August 2009
Roche Molecular Systems December 2000 - November 2003
DOE Joint Genome Institute December 1997 - December 1999
Syntex / Roche Biosciences July 1996 - December 1997
Skills
Assay Development, Next Generation..., Sequence Analysis, Genomics, Multiplex PCR, qPCR, RT-PCR, SNP genotyping, Probe Design, Primer Design, Molecular Biology, Infectious Diseases, Cell Culture, Biochemistry, Molecular Cloning, Biotechnology, Nucleic Acid Extraction, Restriction Mapping, HPLC, Bioanalyzer, DNA sequencing, DNA Sequencing, Life Sciences, R&D, PCR, Sequencing
Education
San Francisco State University 1993 — 1996
MS, Cell and Molecular Biology, Thesis incomplete
San Jose State University 1986 — 1992
BS, Biochemistry
San Jose State University 1986 — 1992
BA, System Physiology
DOE Joint Genome Institute July 2014 - Present
Scripps Institution of Oceanography September 2008 - June 2014
J. Craig Venter Institute 2012 - 2012
Scripps Institution of Oceanography January 2006 - September 2008
UC Davis January 2003 - December 2005
University of California, Davis 2001 - 2005
UC Davis January 2004 - December 2004
UC Davis September 2003 - December 2003
Scripps Institution of Oceanography June 2003 - September 2003
Birch Aquarium at Scripps June 2002 - September 2002
Skills
Molecular Biology, Microbiology, Microscopy, Marine Biology, Biotechnology, Science, Laboratory, Biology, Ecology, Biochemistry, Research, PCR, Biofuels, Chemistry, Scientific Writing, Public Speaking, Gel Electrophoresis, Analytical Chemistry, Mass Spectrometry, Bioinformatics, Chromatography, Molecular Cloning, Genetics, Genomics, Lifesciences, Fluorescence Microscopy, Spectroscopy, Experimentation, Teaching, Algae, HPLC, DNA sequencing, Experimental Design, Sustainability, Molecular Genetics, GC-MS, Science Communication, DNA extraction, Sequencing, Site-directed..., Vacuum Pumps, Fluorescence, Climate, Protein Expression, Cell Culture, Life Sciences, GCMS, Climate Policy, LC-MS, Synthetic Biology
Education
University of California, San Diego 2008 — 2013
PhD, Marine Biology
University of California, San Diego 2008 — 2012
Master's degree, Marine Biology
University of California, Davis 2001 — 2005
Bachelor of Science (B.S.), Biological Science
The University of Queensland 2003 — 2003
Visiting Undergraduate Student, Marine Biology and Terrestrial Ecology
La Jolla High School 1997 — 2001
DOE Joint Genome Institute August 2015 - Present
DOE Joint Genome Institute April 2013 - Present
DOE Joint Genome Institute August 2011 - Present
DOE Joint Genome Institute July 2010 - Present
Lawrence Berkeley National Laboratory December 2010 - April 2013
DOE Joint Genome Institute December 2010 - April 2013
DOE Joint Genome Institute September 2006 - December 2010
DOE Joint Genome Institute September 2003 - September 2006
University of New Mexico 2000 - 2003
Stanford University 1994 - 2000
Skills
Biophysics, Genomics, Sequence Analysis, Bioinformatics, Sequencing, DNA sequencing, Molecular Biology, DNA, Genetics, Experimental Design, Microbiology, Computational Biology, Science, Lifesciences, Biochemistry, Western Blotting, PCR, Biotechnology, Life Sciences, DNA Sequencing
Education
Stanford University 1994 — 2000
PhD, Biophysics
Harvard University 1990 — 1994
AB, Physics
PayPal April 2014 - Present
Lawrence Berkeley National Laboratory October 2011 - March 2014
DOE Joint Genome Institute October 2011 - March 2014
StumbleUpon May 2007 - October 2011
Skills
HBase, GWT, Java, Scala, C++, JQuery, AJAX, Akka, PHP, Unix Shell Scripting, CSS, Ruby, Hadoop, REST, Bash, Python, Shell Scripting, jQuery, Distributed Systems, JavaScript, Objective-C, Ruby on Rails, Perl, MySQL, Scrum, JUnit, Linux, Scalability, Software Design, Tomcat, Apache, Memcached, HTML 5, Software Engineering, Algorithms, Agile Methodologies, Amazon Web Services..., XML, Web Applications, JSON, MongoDB, Subversion, Android, PostgreSQL, Git, Open Source
Education
Case Western Reserve University 1994 — 1999
Celgene 2012 - Present
LBNL 2004 - December 2012
DOE Joint Genome Institute 2010 - 2012
Skills
Bioinformatics, Genomics, Computational Biology, Annotation, Molecular Biology, Sequencing, Metabolic Engineering, Metagenomics, Genome Analysis, RNAseq, ChIP-seq, R, Perl, Java, C++, Comparative Genomics, Molecular Cloning, Cell, Sequence Analysis, Biochemistry, DNA sequencing, Lifesciences, DNA, PCR, Genetics, Microbiology, NGS, Transcriptomics, Computational Genomics, Epigenetics, Biomarkers, Cancer Research, Data Analysis
Education
University of California, Berkeley 2004 — 2007
PostDoc, Bioinformatics/Genomics
Panepistimio Kritis 1997 — 2002
PhD, Molecular Biology & Biomedicine
Panepistimio Kritis 1995 — 1997
MSc, Biotechnology
Ethnikon kai Kapodistriakon Panepistimion Athinon 1991 — 1995
BSc, Biology
kW Engineering September 2014 - Present
kW Engineering June 2013 - September 2014
kW Engineering June 2012 - June 2013
kW Engineering November 2009 - June 2012
Adventure Film Works January 2005 - January 2010
DOE Joint Genome Institute July 2006 - December 2006
DOE Joint Genome Institute September 2002 - January 2005
Skills
Testing, Program Management, Entrepreneurship, Film Production, Business Development, Mechanical Engineering, Schools Energy Auditing, Energy Expenditure Plans, Prop 39
Education
University of California, Berkeley 2000 — 2002
MS, Mechanical Engineering
University of California, Berkeley 1995 — 1999
BS, Mechanical Engineering
DOE Joint Genome Institute August 2015 - Present
UC Berkeley August 2011 - July 2015
The Ohio State University 2006 - June 2011
Beijing Normal University September 2002 - June 2005
Skills
Molecular Biology, Molecular Cloning, Genetics, Protein Expression, Cell Biology, Molecular Genetics, Protein Purification, Confocal Microscopy, Fluorescence Microscopy, DNA sequencing, qPCR, Genomics, PCR, RT-PCR, Western Blotting, Molecular Microbiology, RNAseq, Cell Signaling, Fungal Genetics and..., R, Immunoprecipitation, HPLC (Dionex and..., Python, Unix, immunocytochemistry, Immunoblotting, Biochemistry, Bioinformatics
Education
The Ohio State University 2006 — 2011
Ph. D, Molecular Genetics
Beijing Normal University 2002 — 2005
M.S, Cell Biology
Beijing Normal University 1998 — 2002
B. S, Biochemistry
Beijing University of Chemical Technology June 2015 - Present
Oklahoma State University, Stillwater March 2012 - March 2014
DOE Joint Genome Institute 2009 - 2011
Jacobs 2006 - 2010
NASA JSC 2004 - 2006
Montana State University 2000 - 2003
Skills
Algal biotechnology, Biogeochemistry, Physico-chemical Biology, Microbiology, Biotechnology, Biochemistry, R&D, Lifesciences, Biofuels, Spectroscopy, Science, Algae, Characterization, Laboratory, Microscopy, Biology, PCR, Chemistry, Molecular Biology, Genomics, Cell Biology, Analytical Chemistry, Fermentation, Microbial Ecology, Environmental..., Scientific Writing, Sequence Analysis, Fluorescence Microscopy, Technology Transfer, Confocal Microscopy, Gel Electrophoresis, Life Sciences
Education
Московский Государственный Университет им. М.В. Ломоносова (МГУ) -Moscow State University after M.V. Lomonosov (Russia) 1978 — 1981
PhD, Physico-chemical Biology, Microbiology
Odessa National 'I.I. Mecnikov' University
Master of Science (MSc), Biochemistry and Molecular Biology
Stryker August 2014 - Present
MIS Implants Technologies, Inc. USA August 2013 - July 2014
GlaxoSmithKline June 2012 - August 2013
DOE Joint Genome Institute January 2008 - June 2012
Genentech, Inc July 2006 - December 2007
Tablas Creek Vineyards February 2006 - June 2006
Santa Cruz Biotechnology February 2006 - June 2006
Environmental Analytical Service, Inc. October 2004 - February 2006
Skills
Outside Sales, Lifesciences, Dental Sales, Dental Implants, Biotechnology, Protein Chemistry, PCR, Biochemistry, Molecular Biology, Purification, Antibodies, Protein Purification, Microbiology, Chromatography, Gel Electrophoresis
Education
California Polytechnic State University-San Luis Obispo 2001 — 2006
Bachelor of Science, Biochemistry; Molecular Biology
Lawrence Livermore National Laboratory 2004 - Present
Counter Culture Labs October 2013 - Present
BioCurious 2012 - Present
Blue Nomad Foundation 2013 - Present
Glowing Plant April 2013 - June 2013
Joint Bioenergy Institute 2008 - 2013
DOE Joint Genome Institute 2009 - 2009
Lawrence Livermore National Laboratory 2005 - 2007
Harvard Medical School 2001 - 2004
University of New Mexico 1994 - 2000
Skills
Bioinformatics, Computational Biology, Systems Biology, Genetics, Genomics, Microbiology, Machine Learning, Molecular Biology, Biology, Life Sciences, Synthetic Biology, Biotechnology, Metagenomics, Science, Thinking Outside The Box, Idea Generation, Creative Solutions, Comparative Genomics, Mad Scientist, Interdisciplinary, Interdisciplinary..., Non-profit Leadership, Community Development, Proteomics, DNA sequencing, Protein Chemistry, Scientific Writing, Data Mining, Microscopy, Scientific Computing, Sequence Analysis, Experimentation, Molecular Cloning, Mathematical Modeling, Biochemistry
Education
Harvard Medical School 2001 — 2004
Postdoctoral Fellow, Computational Biology
The University of New Mexico 1994 — 2000
Ph.D., Computer Science
Stanford University 1991 — 1993
M.S., Computer Science
Ghent University 1988 — 1991
MS, Electrical Engineering
Katholieke Industriele Hogeschool Oost-Vlaanderen 1983 — 1988
M.E., Electrical Engineering
San Francisco Bay Area (East Bay) 2011 - Present
Moonlight Graphics November 2008 - February 2011
DOE Joint Genome Institute November 2007 - October 2008
TATUM, LLC December 2006 - November 2007
CLARITY MEDICAL SYSTEMS, BARCLAYS GLOBAL INVESTORS, ACORDIA INSURANCE SERVICES January 2006 - December 2006
M Squared Consulting March 2004 - February 2006
HELLER EHRMAN WHITE & MCAULIFFE LLP, BUSINESS WIRE, CERTIFIED EMPLOYMENT GROUP January 2002 - December 2002
ODWALLA, INC January 2000 - May 2002
INFOMANIA PRINTING & PREPRESS January 1996 - January 2000
Education
California State University-East Bay 2010 — 2012
Certificate, Human Resource Management Program
American River College
Business Administration
Meramec Community College
ICTA TRAINING, TRAVEL AND TOURISM
Joint BioEnergy Institute October 2014 - Present
Lawrence Berkeley National Laboratory October 2012 - November 2014
DOE Joint Genome Institute August 2007 - September 2012
Lawrence Livermore National Laboratory October 2005 - July 2007
Intel Corporation June 2003 - October 2005
US Navy August 1993 - August 1999
Skills
Analysis, Management, Financial Accounting, Project Planning, Logistics, Financial Modeling, Cross-functional Team..., Financial Analysis, Data Analysis, Forecasting, Competitive Analysis, Program Management, Process Improvement, Business Strategy, Budgets, Project Management, Strategic Financial..., Due Diligence, Strategic Planning, Managerial Finance, Procurement, Operations Management, Business Planning, Strategy, Financial Reporting, Negotiation, Internal Controls, Supply Chain Management, Policy, Risk Management, Business Process..., Human Resources, Finance, Six Sigma, Start-ups, Leadership, Management Consulting, Government, Organizational..., Analytics, Team Leadership, Business Development, Product Development, Contract Negotiation, Business Analysis, Performance Management, Training, Business Process, Market Research, Change Management
Education
University of California, Berkeley, Haas School of Business 2007 — 2010
MBA, Finance, Marketing, General Mgmt
University of California, Berkeley, Haas School of Business 2001 — 2003
BS, Business Administration
Tracy High School 1989 — 1993
Facebook 2015 - Present
Aprotea Biochips, Metrimax LLC, LBNL January 2002 - Present
DOE Joint Genome Institute 2006 - 2015
Stanford University 2003 - 2006
Roche Bioscience 1998 - 1999
University of California 1998 - 1998
Applied Research Labs 1989 - 1990
Skills
Bioinformatics, Computational Biology, Genomics, Informatics, Perl, SQL, Python, Unix Shell Scripting, Data Mining, Phylogenetics, Entrepreneurship, High Performance..., DNA sequencing, Genetics, R, Machine Learning, Sequencing, Sequence Analysis, Lifesciences, Systems Biology, DNA Sequencing
Education
University of California, San Francisco
PhD, University of California, San Francisco (UCSF)
University of Texas at Austin
BA, BS, MA, Computer Science, Mathematics
DOE Joint Genome Institute September 2009 - Present
Broad Institute of MIT and Harvard September 2007 - September 2009
UCLA 2001 - 2007
UCLA, Human Genetics 2001 - 2003
Paracel, a Celera business 1999 - 2001
University of Washington 1998 - 1999
Chiron 1997 - 1998
Tularik 1997 - 1997
Roche 1996 - 1996
Skills
Bioinformatics, Genomics, Computational Biology, Python, Comparative Genomics, Sequencing, Statistics, Biochemistry, Proteomics, Protein Chemistry, Biology, Biophysics, Molecular Biology, Protein Engineering, Human Genetics, Genetics, Population Genetics, Sequence Analysis, DNA sequencing, Biotechnology, Phylogenetics, DNA, R
Education
University of California, Los Angeles 2001 — 2007
Ph.D., Human Genetics, Bioinformatics
University of Washington 1998 — 1999
Biomolecular Structure and Design
University of California, Santa Cruz
B.S., Biochemistry and Molecular Biology
Vungle 2014 - Present
ModCloth 2013 - 2014
Teksera 2012 - 2014
Netflix 2012 - 2013
Kleintech 2009 - 2012
DOE Joint Genome Institute 2007 - 2009
CNET Networks 2005 - 2007
eBay 2003 - 2004
NextCard 1998 - 2002
TDS Healthcare Systems 1994 - 1997
Skills
Software Engineering, Agile Methodologies, Software Development, Mobile Applications, Enterprise Architecture, Agile Project Management, Enterprise Software, E-commerce, Scrum, UML, Distributed Systems, Start-ups, Product Management, JIRA, Strategy, Cross-functional Team..., Google Analytics, Executive Management, Scalability, Java, SOA, SDLC, Analytics, OOP, Usability Testing, Global Teams, User Experience, Entrepreneurship, IT Strategy, Architectures, OpenERP, Team Building, Cloud Computing, Web Services, Off-shore Teams, OOAD, Wordpress, Google Apps, social APIs, Enterprise Portals, Test Automation..., N-tier, CRM, Custom CMS Development, Full SDLC, Pivotal Tracker, Architecture
Education
New York Institute of Technology-Old Westbury 1980 — 1982
Master of Science (M.S.), Computer Science
City University of New York City College 1977 — 1980
Bachelor of Science (B.S.), Computer Science
ModCloth December 2012 - October 2014
Pacific Biosciences June 2011 - December 2011
Oakland University January 2007 - October 2010
Oakland University January 2007 - April 2007
DOE Joint Genome Institute May 2006 - December 2006
Oakland University August 2002 - May 2006
UnCoRe, Oakland University May 2002 - July 2002
Clonlara High Scool August 2000 - May 2002
Eastern Michigan University August 2001 - April 2002
Skills
Pattern Recognition, Machine Learning, Python, Matlab, SQL, Julia, Ruby, R, Multilabel..., Image Segmentation, Programming, Computer Science, Data Mining, C++, Algorithms, Image Processing, Data Analysis, Statistics, Research
Education
Oakland University 2002 — 2010
M.S., PhD
Eastern Michigan University 2000 — 2002
B.S.
Harvey Mudd College 1998 — 2000
Wild Type Advisors October 2013 - Present
AltheaDx, Inc. 2009 - 2013
Althea Technologies, Inc. 2002 - 2009
DOE Joint Genome Institute 2001 - 2002
GeneTrace Systems 1995 - 2001
Skills
Biotechnology, Lifesciences, Personalized Medicine, Genomics, Drug Discovery, Molecular Biology, Assay Development, DNA, Biochemistry, Sequencing, PCR, DNA sequencing, qPCR, Mass Spectrometry, Genotyping, Clinical Trials, Genetics, DNA Sequencing, Life Sciences, Gene Expression
Education
University of California, Berkeley 1985 — 1991
Ph.D., Biophysical Chemistry
University of California, Santa Barbara 1980 — 1985
BA, Chemistry
DOE Joint Genome Institute June 2002 - Present
Self-Employed 2000 - Present
DoubleTwist, Inc. September 1999 - November 2001
Pangea Systems, Inc. January 1997 - September 1999
Skills
Web Design, Content Development, Illustration, Leadership, CSS, Usability Testing, Software Documentation, User Experience, Logo Design, Web Development, Illustrator, JavaScript, XHTML, Information Architecture, Technical Writing, PHP, WordPress, Photography, User Interface Design, Content Strategy
Education
University of California, Santa Cruz 1989 — 1993
B.A., American Studies
DOE Joint Genome Institute, LBNL 2009 - Present
DOE Joint Genome Institute 2007 - Present
JGI September 2003 - Present
Education
San Francisco State University 1992 — 1995
DOE Joint Genome Institute Computer ScientistLawrence Livermore National Laboratory1997 - Present
Skills
Molecular Biology, Genomics, Life Sciences, Bioinformatics, Perl, Computational Biology, Biotechnology, Data Analysis, Genetics, Biochemistry, Python, Relational Databases, Web Development
Education
University of Oklahoma 1987 — 1993
Chemical Engineer
Joint Genome Institute PhD StudentUC Davis2007 - Present
DOE Joint Genome Institute 2001 - Present
Education
University of California, Davis 2007 — 2012
The University of Texas at Arlington
Los Alamos National Laboratory Technical and Operational Project ManagerLos Alamos National LaboratoryOctober 2013 - Present
Los Alamos National Laboratory May 2013 - October 2013
DOE Joint Genome Institute 2009 - August 2013
Los Alamos National Laboratory 2006 - 2009
Los Alamos National Laboratory 1996 - 2006
Howard Hughes Medical institute 1987 - 1990
Skills
Genomics, Microbiology, Biochemistry, PCR, Molecular Biology, Science, Bioinformatics, Lifesciences, Laboratory, DNA, Protein Chemistry, Sequencing, Chemistry, Genetics, Computational Biology, R&D, DNA sequencing, Cell, Experimentation, Assay Development, Protein Purification, Life Sciences, DNA Sequencing
Education
North Carolina State University 1985 — 1987
MS, Plant Physiology
Lenoir-Rhyne University 1981 — 1985
BS, Biology
DOE Joint Genome Institute November 2009 - Present
Stanford University School of Medicine April 2004 - March 2007
Stanford University School of Medicine March 2003 - March 2004
University of Pittsburgh School of Medicine May 2001 - January 2003
Education
Delhi University
Ph.D, Molecular Biology
Life Technologies June 2013 - Present
XDx February 2012 - May 2013
Novartis October 2010 - May 2012
UC Santa Cruz September 2008 - September 2010
DOE Joint Genome Institute June 2007 - September 2010
Skills
Bioinformatics, Genomics, Computational Biology, R, PCR, DNA sequencing, Genetics, Perl, Sequencing, Comparative Genomics, Lifesciences, Biotechnology, Biochemistry, Statistics, Python, Machine Learning, Big Data, Pipeline Development, Big Data Analytics, Data Analysis, Software Architecture, Project Management, Project Planning, Customer Engagement, Customer Interaction, Process Efficiency, C, C++, Java, Product Development, Product Design, SQL, Relational Databases, Hadoop, Distributed Systems, Cluster Management, Cluster Analysis, Algorithm Design
Education
University of California, Santa Cruz 2008 — 2010
M.S., Bioinformatics and Biomolecular Engineering
University of California, Santa Cruz 2004 — 2008
B.S., Bioinformatics
Lawrence Livermore National Laboratory October 2013 - Present
Lawrence Livermore National Laboratory (LLNL) January 2010 - Present
Lawrence Livermore National Laboratory (LLNL) April 2010 - September 2012
Lawrence Livermore National Laboratory February 2010 - September 2012
DOE Joint Genome Institute January 2009 - July 2009
Joint Genome Institute, Lawrence Berkeley National Laboratory 2009 - July 2009
Lawrence Livermore National Laboratory (LLNL) June 2003 - November 2008
Lawrence Livermore National Laboratory September 2000 - October 2003
Lawrence Livermore National Laboratory January 2000 - January 2003
Lawrence Livermore National Laboratory June 1994 - September 2000
Skills
Simulations, Program Management, High Performance..., Strategy, Databases, Project Management, Distributed Systems, Team Building, Algorithms, Software Development, Computer Science, Leadership, Proposal Writing, Management, Scientific Computing, System Architecture, MPI, Workforce Management, System Administration, Linux, Parallel Computing, Web Development, Fortran, Training, Strategic Planning, Enterprise Software, Data Analysis, Numerical Analysis
Education
University of California, Davis 1985 — 1996
Ph.D., Applied Math, Computational Science
UC Davis
Ph.D, Engineering Applied Science/Computational Science
DOE Joint Genome Institute April 2010 - Present
PrO Unlimited February 2005 - June 2009
HP/Agilent September 1997 - June 2003
School Research and Service April 1985 - September 1997
Skills
Unix, Perl, SaaS, Testing, Software Development, Scrum, Linux, SQL, Databases, Software Engineering, CVS, Distributed Systems, Oracle, PostgreSQL, Software Documentation, Python, Programming, MySQL, Shell Scripting, Cloud Computing, R, Agile Methodologies, Big Data, MongoDB, Git, REST
Education
California State University-East Bay 2003 — 2004
B.S., Computer Science/Mathematics
California State University-San Marcos 1993 — 1995
Bachelor of Science (BS), Computer Science
Saddleback College 1988 — 1992
Computer Science and Mathematics, Computer Science
Roche Molecular Systems April 2015 - Present
DOE Joint Genome Institute November 2012 - Present
Joint Genome Institute, Lawrence Berkeley National Laboratory May 2008 - October 2012
Virginia Tech August 2004 - May 2008
Virginia Tech May 2007 - June 2007
GlaxoSmithKline May 2004 - August 2004
Virginia Tech August 2003 - May 2004
VERITAS Software January 2003 - June 2003
Skills
Perl, Bioinformatics, Algorithms, Computational Biology, Hadoop, C, Databases, Unix Shell Scripting, Matlab, High Performance..., Unix, Software Development, Computer Science, Data Mining, Object Oriented Perl, Object Oriented Design, Java, MySQL, C/C++ STL, Bioinformatics pipelines, R, Bash, JavaScript, Machine Learning, Core Java, R (some experience), Mathematica, SGE, Torque, Simulations, PostgreSQL, PHP, Secondary metabolites &...
Education
Virginia Polytechnic Institute and State University 2003 — 2008
Ph.D., Computer Science
Virginia Polytechnic Institute and State University 2003 — 2005
M.S., Computer Science
Birla Institute of Technology and Science, Pilani 1999 — 2003
B.E. (Hons), Computer Science
Lawerence Berkeley Laboratory Senior Research AssociateLawrence Berkeley National Laboratory2000 - Present
DOE Joint Genome Institute 2000 - 2007
Skills
Molecular Biology, Synthetic Biology, DNA sequencing, Biochemistry, Genomics, Computational Biology, DNA, Bioinformatics, Molecular Cloning, Sequence Analysis, PCR
Education
University of Missouri-Saint Louis 1996 — 2000
Celera Diagnostics 2001 - Present
DOE Joint Genome Institute 1999 - 2001
Lawrence Livermore National Laboratory 1997 - 1999
Skills
Genomics, High Throughput..., Protein Chemistry
Education
California State University-East Bay
Biology
Apple May 2012 - Present
Apple August 2008 - May 2012
St. Jude Medical May 2006 - August 2008
DOE Joint Genome Institute July 2005 - November 2005
Alcon Laboratories, Inc. January 2005 - June 2005
Skills
Embedded Systems, Embedded Software, Software Engineering, Firmware, Debugging, ClearCase
Education
California Polytechnic State University-San Luis Obispo 2001 — 2005
computer science
Cibus US LLC April 2012 - Present
Illumina September 2011 - April 2012
MedImmune Vaccines May 2011 - September 2011
DOE Joint Genome Institute June 2009 - April 2011
Joint Genome Institute June 2006 - June 2009
Napa Wine Company March 2006 - June 2006
Skills
DNA sequencing, Molecular Biology, PCR, DNA, Biotechnology, Assay Development, SDS-PAGE, ELISA, Cell Culture, Microbiology, Lifesciences, Purification, Protein Purification, Gel Electrophoresis, LIMS, Western Blotting, GLP, Biochemistry, Cell, Sequencing, Protein Chemistry, Molecular Cloning
Education
University of California, Davis 2002 — 2005
Biochemistry & Molecular Biology
DOE Joint Genome Institute March 2008 - Present
Argonne National Laboratory April 2004 - January 2005
EMP Project 2000 - 2004
Skills
Enzyme Kinetics, Structural Biology, Fluorescence, Protein Crystallization, Protein Expression, Enzymes, Biochemistry, Cell, Protein Chemistry
Education
Saratov State University named after N.G.Chernyshevsky 1983 — 1988
M.S./B.S., Biochemistry
Stanford University 2013 - 2013
DOE Joint Genome Institute 2012 - 2013
Life Technologies 2007 - 2011
San Diego Supercomputer Center 2006 - 2007
The Jackson Laboratory January 2005 - September 2006
San Diego Supercomputer Center 2002 - 2005
Skills
Genomics, Computational Genomics, Product Development, High Performance..., Data Analysis, Project Management, Data Warehousing, Data Modeling, Data Mining, Scientific Computing, Java, J2EE Application..., Perl, Python, Object Oriented Design, Next generation..., Financial Analysis, Data Visualization, Sun Certified Java..., J2EE Web Services, Bioinformatics, DNA sequencing, R, SDLC, Cross-functional Team..., Software Development, Databases, Requirements Analysis
Education
San Diego State University-California State University 2009 — 2011
MBA, Executive MBA
Indian Institute of Science
Senior Research Fellow, Biochemistry and Molecular Biology
DOE Joint Genome Institute May 2012 - Present
Illumina February 2010 - May 2012
Colorado State Forest Service June 2009 - November 2009
Colorado State University August 2005 - December 2008
Dynavax Technologies May 2005 - July 2005
Skills
Molecular Biology, Sequence Analysis, Cell Culture, Biotechnology, Genomics, RT-PCR, Genetics, DNA, Sequencing, qPCR, Protein Purification, PCR, Gel Electrophoresis, DNA sequencing, Purification, Genotyping, RNA isolation, In Vitro, Bioinformatics, Biochemistry, Molecular Cloning, Microbiology, Cell, Assay Development, In Vivo, Proteomics
Education
Colorado State University 2005 — 2008
Masters, Cell & Molecular Biology
University of Wisconsin-Madison June 2013 - Present
DOE Joint Genome Institute June 2009 - March 2013
University of Wisconsin-Madison August 2008 - February 2009
University of Wisconsin-Madison January 2003 - August 2008
University of Wisconsin-Madison September 2005 - December 2005
Skills
Experimentation, Wastewater Treatment, Environmental..., Environmental Awareness, Matlab, Mathematical Modeling, Molecular Biology, R, Applied Microbiology, Environmental..., Microbial Ecology, Metagenomics, Metatranscriptomics, Bioinformatics, Genomics, PCR, Microbiology, DNA sequencing, qPCR, Microscopy
Education
University of Wisconsin-Madison 2005 — 2008
Ph.D, Environmental engineering
University of Wisconsin-Madison 2003 — 2005
MS, Environmental engineering
Tsinghua University 1997 — 2001
BE, Environmental engineering
Osher Lifelong Learning Institute, UC Berkeley April 2012 - Present
Lawrence Berkeley National Laboratory February 1980 - Present
DOE - Joint Genome Institute 1998 - 2010
Skills
Engineering, Biotechnology, DNA sequencing, Science, PCR, Project Management, Ergonomics, Mechanical Engineering, Process Modeling, Physics, Data Analysis, Technical Writing, Analysis, Process Improvement, R&D, Genetics, Risk Assessment, Fluorescence Microscopy, Statistics, Leadership, Research, Occupational Health, Process Engineering, Design of Experiments, Microscopy, Policy, Instrumentation, Gel Electrophoresis, DNA Sequencing
Education
University of California, Berkeley 1976 — 2003
MS, Physics, Mechanical Engineering
University of Connecticut 1974 — 1976
Biology
Dovetail Genomics 2013 - Present
Rice University July 2008 - July 2013
UC Berkeley 2006 - 2008
DOE Joint Genome Institute 2003 - 2005
Skills
Bioinformatics, Comparative Genomics, Evolutionary Biology, Computational Biology, Science, Genomics, Scientific Computing, Molecular Biology, Mathematical Modeling, Genetics, Software Development, Python, R, Scientific Writing, Sequencing
Education
University of California, Berkeley 1997 — 2004
PhD, Physics
Brown University 1992 — 1996
ScB, Physics
DOE Joint Genome Institute July 2010 - Present
Montana State University November 2007 - July 2010
Northern Arizona University January 2005 - July 2007
Northern Arizona University August 2004 - July 2007
Idaho State University August 1999 - July 2004
Skills
Cell, Laboratory, Microbiology, Genomics, Molecular Biology, PCR, Research, Bioinformatics, Genetics, Life Sciences, Biochemistry, Environmental Awareness, Science
Education
Idaho State University 1999 — 2007
PhD, Environmental Microbiology
University of Arizona 1991 — 1996
BS, Molecular & Cellular Biology
BioMarin Pharmaceutical Inc. May 2015 - Present
BioMarin Pharmaceutical Inc. June 2012 - May 2015
Catalyst Biosciences July 2007 - April 2012
DOE Joint Genome Institute July 2006 - July 2007
National Genetics Institute
Education
University of California, Los Angeles 2000 — 2004
Bachelor of Science, Physiological Sciences
University of California, Davis November 2014 - Present
Washington State University January 2011 - October 2014
Pacific Northwest National Laboratory 2011 - October 2014
Lawrence Berkeley National Laboratory / DOE Joint Genome Institute 2007 - 2010
DOE Joint Genome Institute 2007 - 2010
Hamburg University of Technology 2004 - 2007
Northern Arizona University 2000 - 2001
Skills
Molecular Biology, Bioinformatics, Genetics, Genomics, Biochemistry, PCR, Lifesciences, Computational Biology, Science, Microbiology, Cell Biology, Biotechnology, Molecular Cloning, DNA, Protein Expression, Sequencing, Protein Chemistry, Life Sciences, Proteomics, DNA sequencing, Sequence Analysis, Protein Purification, DNA Sequencing
Education
Hamburg University of Technology, Hamburg, Germany 2004 — 2007
Doctor of Philosophy (Ph.D.), Microbiology & Biotechnology
Universität Konstanz
Master of Science (M.Sc.), Microbiology
DOE Joint Genome Institute April 2015 - Present
Five9 February 2013 - April 2014
DigitalGlobe 2007 - 2012
Border Collie Solutions, Inc. (BCSI) 2002 - 2003
Skills
Java, Software Development, Software Engineering, Java Enterprise Edition, Spring, SQL, Hibernate 3.1, REST, Agile Methodologies, Maven, Scrum, Hibernate, PostgreSQL, Eclipse, Tomcat, Linux
Education
Diablo Valley College 2004 — 2005
Computer Science
Moscow Institute of Physics and Technology (State University) (MIPT) 1979 — 1985
MSc, Physics
Senzex Corporation March 2011 - Present
Symyx Technologies November 2001 - December 2008
DOE Joint Genome Institute December 1999 - November 2001
Skills
Lifesciences
Education
UCSD 1997 — 1999
BS, biochemistry cell biology