EMBL-EBI Company

Description

The European Bioinformatics Institute is an IGO which as part of the European Molecular Biology Laboratory family focuses on research and services in bioinformatics. Parent organization: European Molecular Biology Laboratory Founder: Michael Ashburner Founded: 1992 Staff: 570 Directors: Ewan Birney, Rolf Apweiler Leaders: Ewan Birney, Rolf Apweiler

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EMBL-EBI Employees

Employee
Years
Job
Industry
Tomasz Adamusiak Tomasz Adamusiak Boston, Massachusetts Details
Tomasz Adamusiak's EMBL-EBI Experience 2008 - 2011
Job Big Data, Semantic Web, Predictive Analytics
Industry Biotechnology
Experience
Thomson Reuters  2014 - Present
Medical College of Wisconsin  2012 - 2014
National Institutes of Health  2011 - 2012
EMBL-EBI   2008 - 2011
Siemens AG  2007 - 2008
Teaching Hospital No.1 in Lodz   2006 - 2007

Skills
Bioinformatics, Clinical Informatics, Informatics, Ontologies, Semantic Web, Genomics, EHR, Data Mining, R, Computational Biology, Immunology, Statistics, Genetics, Biotechnology, Lifesciences, Microarray Analysis, Perl, OWL, Oracle, UMLS, Text Mining, Data Integration, Linked Data, RDF, SPARQL, SNOMED CT, LOINC, RxNorm, Gene Expression..., Medical Informatics, JPA, EclipseLink, Vaadin, SNOMED, Molecular Biology, Clinical Research, Meaningful Use, ICD-10, Systems Biology, Molecular Genetics, Cancer, Clinical Trials, Neuroscience, Functional Genomics, Machine Learning, Java, Drug Discovery, Data Analysis, REDCap, i2b2

Education
Medical University of Lodz   2006 — 2008
PhD, Clinical Immunology, Distinction

Medical University of Lodz   2000 — 2006
MD, Medicine

Friedrich-Alexander-Universität Erlangen-Nürnberg   2005 — 2006
Medicine

Lee Falin Lee Falin Rexburg, Idaho Details
Lee Falin's EMBL-EBI Experience July 2012 - April 2014
Job Visiting Computer Science Faculty at BYUIdaho
Industry Computer Software
Experience
BYU-Idaho  September 2014 - Present
Rogue Amoeba   December 2008 - Present
Quick and Dirty Tips   January 2012 - December 2014
EMBL-EBI   July 2012 - April 2014
Creastoric Software   2010 - February 2012
Virginia Tech  January 2006 - May 2011
Polarian Technology   August 2005 - March 2008
NationsLine   February 2005 - August 2005
R&K Engineering  September 2004 - February 2005
NationsLine   April 2001 - August 2004

Skills
Perl, Python, MySQL, C#, jQuery, Writing, Bioinformatics, R, Web Applications, JavaScript, REST, Objective-C, Science Education, Presentations, iOS development, MongoDB, C++, d3.js, WordPress, Neo4j, Node.js, mongo, C, Android Development

Education
Virginia Tech   2006 — 2011
Doctor of Philosophy (Ph.D.), Genetics, Bioinformatics, and Computational Biology

University of Illinois   2004 — 2005
Bachelor of Science (B.S.), Computer Science

Takis Benos Takis Benos Greater Pittsburgh Area Details
Takis Benos's EMBL-EBI Experience January 1997 - September 1999
Job Vice Chair, Department of Computational and Systems Biology at University of Pittsburgh School of Medicine
Industry Higher Education
Experience
University of Pittsburgh School of Medicine  November 2014 - Present
University of Pittsburgh  2009 - Present
Washington University in St. Louis  September 1999 - April 2002
EMBL - EBI  January 1997 - September 1999

Skills
Molecular Biology, Bioinformatics, Genetics, Genomics, Life Sciences, Science, Computational Biology, Biochemistry, Cell Biology, Cell Culture, Systems Biology, PCR, Lifesciences, Protein Chemistry, Biophysics, Cancer Research, R, Confocal Microscopy, Clinical Research, Statistics, Biotechnology, Proteomics, Data Mining

Education
Panepistimio Kritis   1992 — 1997
PhD, Molecular Biology

Panepistimio Kritis   1991 — 1992
MSc, Molecular Biology

Panepistimio Kritis
BSc, Mathematics

Rutger Evans Rutger Evans Missoula, Montana Details
Rutger Evans's EMBL-EBI Experience June 2015 - August 2015
Job Trainee at EMBLEBI
Industry Computer Software
Experience
EMBL-EBI   June 2015 - August 2015
Agile Data Solutions, Inc   September 2014 - May 2015
University of Montana  December 2012 - September 2014

Skills
Programming, C#, Java, Windows, Eclipse, Python, Microsoft Office, IDLE, Visual Studio, Software Development, Perl, C, Bioinformatics, Linux, Web Applications, Project Management

Education
The University of Montana   2012 — 2015
Bachelor’s Degree, Computer Science

James Elton Davis James Elton Davis South Pasadena, California Details
James Elton Davis's EMBL-EBI Experience 1992 - 1993
Job Gaffer
Industry Broadcast Media
Experience
Filament  1999 - Present
EMBL-EBI   1992 - 1993
Los Alamos National Laboratory  1987 - 1992

Skills
French, Stage Lighting, film, Feature Films, short films, music videos, Television, Fashion Photography, Digital Video, Graphic Design, Lighting, Film, Adobe Creative Suite, Photoshop, Short Films, Microsoft Office, Music Videos, Multimedia, Film Production, Entertainment, Mac, Video Production, Commercials, HD Video, Video, Camera

Education
St. John's College (NM)   1982 — 1986
Bachelor's degree, Liberal Arts and Sciences, General Studies and Humanities

Tomislav Ilicic Tomislav Ilicic Greater New York City Area Details
Tomislav Ilicic's EMBL-EBI Experience October 2013 - December 2014
Job PhD student in bioinformatics
Industry Biotechnology
Experience
Wellcome Trust Sanger Institute  October 2012 - Present
Columbia University in the City of New York  December 2014 - July 2015
The Boston Consulting Group  2015 - 2015
EMBL-EBI   October 2013 - December 2014
The Boston Consulting Group  2014 - 2014
Wellcome Trust Sanger Institute  July 2011 - September 2012
University of Applied Sciences  October 2010 - October 2011
McDonald's Corporation  June 2011 - September 2011
UPC Broadband  July 2008 - September 2009

Skills
Bioinformatics, Software Development, Genetics, Molecular Biology, Genomics, R, Project Management, Presentation Skills, C++, C#, Perl, Machine Learning, Parallel Computing, Big Data Analytics, Python, Java, Web Design, Network Engineering, Statistics, Science, Life Sciences, Computational Biology

Education
University of Cambridge   2012 — 2016
Doctor of Philosophy (PhD), Biomathematics, Bioinformatics, and Computational Biology

University of Applied Sciences Upper Austria   2009 — 2012
Bachelor of Science (BSc), Biomathematics, Bioinformatics, and Computational Biology, Passed with highest distinction

Höhere Technische Lehranstalt Saalfelden   2004 — 2008
Computer Software Engineering, Passed with distinction

Jorge Eduardo Buendía Buendía Jorge Eduardo Buendía Buendía Greater Boston Area Details
Jorge Eduardo Buendía Buendía's EMBL-EBI Experience June 2015 - Present
Job Master of Science Student at Harvard University
Industry Research
Experience
EMBL-EBI   June 2015 - Present
AILUM: Asociación de Ingenieros Líderes Unidos por México A.C.   December 2012 - Present
The University of Edinburgh  April 2014 - August 2014
Microsoft Research  January 2014 - April 2014
Wellcome Trust Sanger Institute  September 2011 - May 2012
Universidad Nacional Autónoma de México   August 2010 - June 2011

Skills
Science, Research, Genomics, Neuroscience, Cancer Genomics, Molecular Biology, Biotechnology, Bioinformatics, R, Entrepreneurship, Biochemistry, Lifesciences, Biology, Cell Biology, Genetics, Life Sciences, PCR

Education
Harvard University   2014 — 2016
Science Master, Computational Biology and Quantitative Genetics

University of Cambridge   2012 — 2013
Master of Philosophy (MPhil), Biology/Biological Sciences, General

Universidad Nacional Autónoma de México   2008 — 2012
Bachelor's degree, Genome Sciences/Genomics

Stanford University   2011 — 2011
Stanford Summer International Honors Program

Gemma Holliday Gemma Holliday San Francisco Bay Area Details
Gemma Holliday's EMBL-EBI Experience November 2005 - November 2011
Job Executive Director of SFLD, MACiE and CSA
Industry Research
Experience
UCSF  January 2012 - Present
EMBL-EBI   November 2005 - November 2011
University of Cambridge  October 2002 - September 2005

Skills
Cheminformatics, Chemistry, Bioinformatics, Lifesciences, Computational Chemistry, Enzyme Reaction..., Drug Design, Organic Chemistry, Biochemistry, Protein Chemistry, Analytical Chemistry, Enzymes, QSAR, R&D, Science, Biotechnology, Systems Biology, Computational Biology, Genomics, Catalysis, Medicinal Chemistry, Molecular Biology, Perl, MySQL, R, Linux, Proteomics, NMR, Molecular Dynamics, Structural Biology, X-ray crystallography, Mass Spectrometry, Docking, Protein Expression, Life Sciences

Education
University of Cambridge   2002 — 2005
PhD, Cheminformatics

University of St. Andrews   1998 — 2002
MChem, Chemistry

Aedin Culhane Aedin Culhane Boston, Massachusetts Details
Aedin Culhane's EMBL-EBI Experience 2002 - 2002
Job Computational Biologist at DanaFarber Cancer Institue, Harvard School of Public Health
Industry Research
Experience
Dana-Farber Cancer Institute  November 2005 - Present
Harvard School of Public Health  November 2005 - Present
Brandeis University  June 2008 - September 2008
University College Dublin  2003 - 2005
Université Claude Bernard Lyon 1  April 2003 - May 2003
University College Cork, Ireland   2001 - 2003
EMBL-EBI   2002 - 2002
BBSRC   1999 - 2001
University of Manchester  1996 - 1999
Keele University  1994 - 1995

Skills
Bioconductor, R, Unix, Systems Biology, Computational Biology, Bioinformatics, Microarray Analysis, Sequence Analysis, Functional Genomics, Transcriptomics, Biostatistics, Machine Learning, Principal Component..., Multivariate Statistics, Cancer Research, Biomarker Discovery, Breast Cancer, Molecular Biology, Genomics, Cancer, Cell Culture, Microarray, Statistical Modeling, HTML, Translational Research, Python, Proteomics, DNA sequencing, Sequencing, Genetics, Biology, DNA Sequencing

Education
The University of Manchester   1996 — 2000
PhD, Molecular Biology - NeuroImmunology

University of Limerick   1990 — 1994
BSc, Biochemistry

Worcester Polytechnic Institute   1992 — 1992
BSc, Chemical Engineering

Ravensara Travillian Ravensara Travillian Greater Seattle Area Details
Ravensara Travillian's EMBL-EBI Experience February 2010 - January 2011
Job Research Scientist at University of Washington
Industry Research
Experience
University of Washington  September 2013 - Present
University of Washington  September 2012 - September 2013
University of Washington  September 2011 - August 2012
EMBL-EBI   February 2010 - January 2011
University of Washington  2000 - 2006
UW Medicine  2000 - 2006

Skills
Informatics, Public Health, Data Analysis, Bioinformatics, Clinical Research, Research, Healthcare Information..., Cancer, Neuroscience, Science

Education
University of Washington School of Medicine   2000 — 2006
PhD, MS, Biomedical & Health Informatics

University of Alabama at Birmingham   1976 — 1980
BA, French, German

Cele(rino) Abad-Zapatero Cele(rino) Abad-Zapatero Greater Chicago Area Details
Cele(rino) Abad-Zapatero's EMBL-EBI Experience September 2009 - December 2009
Job Adjunct Professor at University of Illinois at Chicago
Industry Pharmaceuticals
Experience
University of Illinois at Chicago  June 2013 - Present
University of Alcala de Henares   February 2013 - Present
Optibrium Ltd.   June 2012 - Present
University of Illinois at Chicago  March 2007 - Present
Center for Pharmaceutical Biotechnology   2005 - Present
Center Molecular Biology Severo Ochoa, Madrid-Spain   May 2011 - August 2011
Parc Cientific Barcelona   February 2010 - July 2011
Parc Cientific de Barcelona   2010 - 2010
EMBL-EBI   September 2009 - December 2009
European Bioinformatics Institute  2009 - December 2009

Skills
Molecular Biology, Drug Design, Computational Chemistry, Drug Discovery, X-ray crystallography, Bioinformatics, Pharmaceutical Industry, Biochemistry, Molecular Modeling, Protein Chemistry, Science, Structural Biology, Biotechnology, Assay Development, Biophysics, Protein Purification, Lifesciences, Computational Biology, Organic Chemistry, Genomics, Life Sciences, Protein Expression, Spectroscopy

Education
The University of Texas at Austin   1972 — 1978
Doctor of Philosophy (Ph.D.), Molecular Biophysics

Universidad de Valladolid   1964 — 1969
Bachelor of Science (BSc), Physics

Sirarat Sarntivijai Sirarat Sarntivijai Ann Arbor, Michigan Details
Sirarat Sarntivijai's EMBL-EBI Experience December 2014 - Present
Job Bioinformatician Ontologist at EMBLEBI
Industry Biotechnology
Experience
EMBL-EBI   December 2014 - Present
FDA  May 2012 - November 2014
National Center for Integrative Biomedical Informatics   September 2007 - April 2012
Center for Computational Medicine and Bioinformatics, University of Michigan   May 2006 - June 2007
CCM Airport Equipment   2003 - 2004
BEA Systems  2002 - 2003

Skills
Bioinformatics, Python, Perl, Algorithms, Java, R, Programming, Systems Biology, Adverse Events, Data Mining, Ontology, Computational Biology, Pharmacology, Informatics, Biostatistics, Statistics, Machine Learning, Genomics, Genetics, Microarray Analysis

Education
University of Michigan   2007 — 2012
Ph.D., Bioinformatics

University of Michigan   2004 — 2006
M.Sc., Bioinformatics

Mahidol University   1998 — 2002
B.Sc., Computer Science

Benjamin Stauch Benjamin Stauch La Jolla, California Details
Benjamin Stauch's EMBL-EBI Experience 2010 - 2013
Job Research Associate at The Scripps Research Institute
Industry Research
Experience
The Scripps Research Institute  July 2014 - Present
University of Cambridge  2010 - 2013
EMBL-EBI   2010 - 2013
EMBL-EBI   2008 - 2012

Skills
Bioinformatics, Molecular Biology, Computational Biology, Systems Biology, Sequence Analysis, Biochemistry, Drug Discovery, NMR spectroscopy, X-ray crystallography, Structural..., Knime, Chemogenomics, Life Sciences, Structural Biology, NMR, Molecular Modeling

Education
The Goethe University Frankfurt   2003 — 2007
Diploma, Bioinformatics

Abhik Seal Abhik Seal Bloomington, Indiana Area Details
Abhik Seal's EMBL-EBI Experience June 2014 - August 2014
Job Phd Candidate Cheminformatics IU
Industry Information Technology and Services
Experience
AbbVie  May 2015 - Present
Indiana University Bloomington  August 2011 - Present
Indiana University Bloomington  August 2011 - Present
EMBL-EBI   June 2014 - August 2014
Dow AgroSciences  May 2013 - August 2013
IUSSTF   June 2012 - August 2012
Open Source Drug Discovery   January 2009 - July 2011
State Bank of India  January 2009 - July 2011

Skills
Computational Biology, Drug Design, Drug Discovery, Molecular Modeling, Molecular Biology, R, Python, Data Structures, Chemgenomics, System pharmacology, Network medicine, Cheminformatics, Java, semantic web, Network Science, Data Fusion, Semantic Web, Bioinformatics, Machine Learning, Informatics, Lifesciences, Data Mining, Pharmacology, Statistics, Perl, Algorithms

Education
Indiana University Bloomington   2011 — 2016
Doctor of Philosophy (PhD), cheminformatics

West Bengal University of Technology   2006 — 2009
Master of Science (M.Sc.), Bioinformatics

St pauls college   2003 — 2006
Bachelor of Science (B.Sc.)hons, Microbiology

Victor Chistyakov Victor Chistyakov Newton Highlands, Massachusetts Details
Victor Chistyakov's EMBL-EBI Experience 2002 - 2005
Job Software Engineer at Oracle
Industry Biotechnology
Experience
Oracle  November 2013 - September 2015
Knome Inc  2012 - 2013
Dana-Farber Cancer Institute  2010 - 2012
New York University  2007 - 2009
Massachusetts Institute of Technology (MIT)   2006 - 2007
EMBL-EBI   2002 - 2005

Skills
Java, C++, Software Development, JavaScript, Ext JS, Front-end Development, AngularJS, Data Analysis, Algorithms, Bioinformatics

Education
National Research Nuclear University MEPhI (Moscow Engineering Physics Institute)
Master of Science (MS), Applied Mathematics and Computer Science